CDS

Accession Number TCMCG006C00316
gbkey CDS
Protein Id XP_022576324.1
Location complement(join(3274241..3274442,3274514..3274804,3274877..3275693,3275780..3277841))
Gene LOC106346267
GeneID 106346267
Organism Brassica napus

Protein

Length 1123aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022720603.1
Definition phytochrome A [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCAGGTTCTAGGCCGAGCCACTCCTCCGAGGGCTCAAGGCGGTCAAGACACAGCGCTAGGATCATTGCGCAGACCACTGTTGACGCAAAGCTCCACGCTGACTTCGAGGAATCAGGCAGCTGCTTTGATTACTCAACCTCGGTCCGCGTCACCGGACCCGTTGTGGAGAACCAGCCACCAAGGTCTGACAAGGTGACCACCACCTATCTCCATCACATACAGAAGGGAAAACTGATTCAGCCCTTCGGCTGTTTGCTCGCCTTGGACGAAAAGACCTTCAAAGTCATTGCCTACAGCGAGAACGCCGCCGAGCTCTTGACGATGGCGAGTCATGCGGTTCCCAGCGTTGGTGAACAGGGTGCTCTAGGCATAGGAACGGACATAAGGAGCCTCTTCACTGCTCCCAGCGCCTCTGCGTTGCAGAAAGCGCTAGGATTCGGAAACGTCTCGCTCTTGAATCCCATTCTCGTGCATTGCAAGACTTCCGCAAAGCCCTTCTACGCGATCGTGCACAGGGTCACAGGGAGCATCATCGTGGACTTCGAACCTGTGAAGCCTTACGAAGTCCCCATGACGGCTGCTGGTGCTTTGCAATCGTACAAGCTCGCTGCAAAGGCCATCACTAGGCTGCAGTCTTTGCCCAGCGGGAGCATGGAGAGGCTCTGCGACACGATGGTTCAGGAGGTTTTCGAGCTCACGGGGTATGACAGAGTGATGGCTTATAAGTTTCACGACGATGATCACGGAGAGGTTGTCTCCGAGGTTACAAAGCCTGGTCTAGAGCCTTACCTTGGCCTCCATTATCCAGCCACAGACATCCCTCAAGCGGCTCGTTTTCTCTTTATGAAGAACAAGGTTCGGATGATAGTTGATTGCAACGCAAAACATGTGACGGTGCTTCAGGACGAAAAGCTTTCCTCTGATCTCACCTTGTGCGGCTCCACGCTCAGAGCGCCGCACAGCTGCCATCTGCAGTACATGGCCAACATGGATTCTATTGCATCTCTTGTTATGGCGGTTGTGGTAAACGAGGAGGACGGAGAAGGTGACGCCGCCGCACCTGATTCCACCGCCCCTCAGAAGAGGAAGAGGCTGTGGGGATTGGTGGTTTGTCACAACACCACTCCGAGGTTTGTTCCGTTTCCTCTCAGGTACGCCTGCGAGTTTCTAGCGCAAGTGTTTGCGATACACGTCAACAAGGAGGTGGAGCTGGAGAATCAGATCGTGGAGAAGAACATCTTGCGTACGCAGACGCTACTCTGCGATATGCTGATGCGTGATGCTCCCCTGGGAATCGTCTCGCAGAGCCCCAACATAATGGACCTTGTGAAATGCGACGGAGCAGCTCTCTTGTACAAAGACAAGGTATGGAAGCTGGGGGTAACTCCGAGCGAGTTCCATCTCCAGGAGATAGCTTCGTGGCTGTGCGAGTACCACACTGACTCAACTGGTCTGAGCACTGATAGCTTGCACGACGCTGGGTTTCCAAGAGCTCTAGCTCTTGGAGACTCGGTCTGCGGAATGGCGGCTGTGAGGATCTCGTCAAAAGACATGATCTTCTGGTTCCGTTCTCACACCGCTGGGGAAGTGAGGTGGGGAGGTGCAAAGCATGATCCAGATGATAGGGATGACGCGAGGAGAATGCACCCGAGGTCTTCCTTCAAGGCTTTTCTTGAAGTGGTCAAGACGAGGAGTTTGCCTTGGAAGGACTATGAGATGGATGCCATACACTCCTTGCAGCTTATTCTGAGGAATGCTTTCAAGGATGGAGAAGCTACTGATGTGAATACGAAGATCATCCACTCGAAGCTGAATGATTTGAAAATTGATGGTATACAAGAGCTAGAAGCTGTCACTAGCGAGATGGTTCGTTTGATCGAGACTGCTACTGTGCCGATATTGGCGGTTGATTCTGATGGATTGGTTAATGGTTGGAACACGAAGATTTCTGAGCTGACTGGTCTTCCGGTTGATGAAGCAATCGGGAAGCATCTACTCACACTTGTTGAAGATTCTTCAGTGGAAATCGTTAAGAGGATGTTAGAGAATGCATTAGAAGGAACTGAGGAGCAGAATGTCCAATTTGAGATCAAGACGCATCTGTCAAGAGCTGACGCTGGACCAATAAGTCTAGTGGTAAACGCATGCGCAAGTAGAGACCTCCACGAAAACGTGGTTGGTGTGTGCTTTGTAGCTCATGATCTTACAGGACAGAAGACTGTGATGGACAAGTTCACTCGCATCGAAGGTGATTACAAGGCCATCATCCAGAATCCAAACCCTCTGATCCCTCCCATATTTGGCACCGACGAGTTCGGGTGGTGCACGGAGTGGAATCCAGCGATGTCAAAGCTAACAGGTCTGAAGCGAGAGGAAGTGATGGACAAGATGCTGCTAGGAGAAGTCTTTGGGACGCAGAAGTCGTGTTGCCGTCTGAAGAATCAAGAAGCGTTTGTGAACCTTGGGATCGTGCTGAACAACGCTGTGACTAGCCAGGAGGCGGAGAAAGTGCCATTTGCTTTTTTTACGAGAGGTGGAAAGTATGTGGAGTGTCTGCTGTGTGTGAGTAAGAAGCTAGACAGGGAAGGTGTGGTGACAGGAGTCTTCTGTTTCCTGCAGCTTGCTAGCCATGAGCTGCAGCAAGCTCTTCATGTTCAGCGTCTAGCTGAGCGGACCGCGTTGAAGAGGTTAAAGGCCTTAGCTTACATTAAAAGACAGATCAGGAATCCGCTGTCCGGTATCATGTTCACAAGGAAAATGATGGAAGTGTCTGAGTTAGGACCAGAGCAGAGAAGGATTCTGCAAACTAGCGCTTTGTGTCAGAAGCAGCTCAGCAAGATCCTGGATGATTCTGATCTCGAAAGCATCATTGAAGGGTGTTTGGATCTTGAGATGAAAGAGTTCAGCTTAAACGAAGTGTTGACTGCTTCCACAAGTCAAGTGATGATGAAGAGTAACGGAAAGAGCGTTAGGATAACAAATGATACAGGAGAAGAAGTGATGTCTGATACTTTGTATGGAGACAGTATCAGGCTTCAGCAAGTCTTGGCGGATTTCATGCTGATGTCTGTTAACTTTACACCATCCGGAGGAGAGCTGACTGTTACAGCTTCACTGAGGAAAGATCAGCTTGGAAGATCTGTGCATCTTGCTTATTTGGAGATCAGAATAACGCATACAGGAGCTGGGTTACCAGAGTTTTTGCTAAACCAAATGTTTGGAACTGAGGAAGATATGTCGGAGGAAGGACTAAGCTTGATGGTTAGCCGGAAACTTGTGAAGCTGATGAATGGAGATGTTCAGTACTTGAGACAAGCTGGGAAATCGAGTTTTATCATCACTGCAGAACTCGCTGCAGCAAACAAGTAG
Protein:  
MSGSRPSHSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSCFDYSTSVRVTGPVVENQPPRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAAELLTMASHAVPSVGEQGALGIGTDIRSLFTAPSASALQKALGFGNVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHVTVLQDEKLSSDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAAAPDSTAPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGVTPSEFHLQEIASWLCEYHTDSTGLSTDSLHDAGFPRALALGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGEATDVNTKIIHSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKISELTGLPVDEAIGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPAMSKLTGLKREEVMDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQEAEKVPFAFFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTALKRLKALAYIKRQIRNPLSGIMFTRKMMEVSELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCLDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNDTGEEVMSDTLYGDSIRLQQVLADFMLMSVNFTPSGGELTVTASLRKDQLGRSVHLAYLEIRITHTGAGLPEFLLNQMFGTEEDMSEEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK